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europdx
k8s
cbio-on-demand
Kubernetes-Docker
Commits
4af3be7b
Commit
4af3be7b
authored
Aug 19, 2019
by
Ľuboslav Pivarč
Browse files
added ci to beta & dev
parent
68587e03
Pipeline
#22485
failed with stages
in 10 seconds
Changes
10
Pipelines
1
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.gitlab-ci.yml
View file @
4af3be7b
...
...
@@ -8,27 +8,27 @@ stages:
-
touch $HOME/.kube/config
-
echo "$KUBE_CONFIG" >> $HOME/.kube/config
.docker-login
:
&docker-login
before_script
:
-
echo -n $CI_REGISTRY_PASSWORD | docker login -u "$CI_REGISTRY_USER" --password-stdin $CI_REGISTRY
# - docker login -u "$CI_REGISTRY_USER" -p "$CI_REGISTRY_PASSWORD" $CI_REGISTRY
# cBioApp build:
# stage: build
# <<: *docker-login
# image: docker:latest
# script:
# - docker build --pull -t "${CI_REGISTRY_IMAGE}:app${CI_COMMIT_SHA}" ./builds/cbioapp
# - docker push "$CI_REGISTRY_IMAGE:app${CI_COMMIT_SHA}"
# when: manual
.docker-build-db
:
script
:
&docker-build-db
-
docker build --pull -t "${CI_REGISTRY_IMAGE}:${CI_COMMIT_REF_NAME}-db${CI_COMMIT_SHA}" ./builds/cbiodb
-
docker push "$CI_REGISTRY_IMAGE:${CI_COMMIT_REF_NAME}-db${CI_COMMIT_SHA}"
.docker-build-job
:
script
:
&docker-build-job
-
docker build --pull -t "${CI_REGISTRY_IMAGE}:${CI_COMMIT_REF_NAME}-job${CI_COMMIT_SHA}" ./builds/job
-
docker push "$CI_REGISTRY_IMAGE:${CI_COMMIT_REF_NAME}-job${CI_COMMIT_SHA}"
#PRODUCTION
cBioDb build
:
stage
:
build
<<
:
*docker-login
image
:
docker:latest
script
:
-
docker build --pull -t "${CI_REGISTRY_IMAGE}:db${CI_COMMIT_SHA}" ./builds/cbiodb
-
docker push "$CI_REGISTRY_IMAGE:db${CI_COMMIT_SHA}"
*docker-build-db
when
:
manual
cBioJob build
:
...
...
@@ -36,17 +36,78 @@ cBioJob build:
<<
:
*docker-login
image
:
docker:latest
script
:
-
docker build --pull -t "${CI_REGISTRY_IMAGE}:job${CI_COMMIT_SHA}" ./builds/job
-
docker push "$CI_REGISTRY_IMAGE:job${CI_COMMIT_SHA}"
*docker-build-job
when
:
manual
deploy to k8s
:
stage
:
deploy
variables
:
NAMESPACE
:
cbio-on-demand
<<
:
*kube-auth
image
:
registry.gitlab.ics.muni.cz:443/europdx/k8s/ci:latest
script
:
-
./yaml/bash.sh
-
kubectl version
-
kubectl apply -f ./yaml
when
:
manual
#BETA
cBioDb build
:
stage
:
build
<<
:
*docker-login
image
:
docker:latest
script
:
*docker-build-db
when
:
manual
cBioJob build
:
stage
:
build
<<
:
*docker-login
image
:
docker:latest
script
:
*docker-build-job
when
:
manual
deploy to k8s
:
stage
:
deploy
variables
:
NAMESPACE
:
cbio-on-demand-beta
<<
:
*kube-auth
image
:
registry.gitlab.ics.muni.cz:443/europdx/k8s/ci:latest
script
:
-
./yaml/bash.sh
-
kubectl version
-
kubectl apply -f ./yaml
#DEV
cBioDb build
:
stage
:
build
<<
:
*docker-login
image
:
docker:latest
script
:
*docker-build-db
when
:
manual
cBioJob build
:
stage
:
build
<<
:
*docker-login
image
:
docker:latest
script
:
*docker-build-job
when
:
manual
deploy to k8s
:
stage
:
deploy
variables
:
NAMESPACE
:
cbio-on-demand-dev
<<
:
*kube-auth
image
:
registry.gitlab.ics.muni.cz:443/europdx/k8s/ci:latest
script
:
-
./yaml/bash.sh
-
kubectl version
-
kubectl apply -f ./yaml
yaml/bind.yml
View file @
4af3be7b
...
...
@@ -5,7 +5,7 @@ metadata:
subjects
:
-
kind
:
ServiceAccount
name
:
cbio-api
namespace
:
cbio-on-demand
namespace
:
__NAMESPACE__
roleRef
:
kind
:
ClusterRole
name
:
cbio-api
...
...
@@ -23,7 +23,7 @@ subjects:
# Reference to upper's `metadata.name`
name
:
cbio-api
# Reference to upper's `metadata.namespace`
namespace
:
cbio-on-demand
namespace
:
__NAMESPACE__
roleRef
:
kind
:
ClusterRole
name
:
cluster-admin
...
...
yaml/config.yml
View file @
4af3be7b
...
...
@@ -2,7 +2,7 @@ apiVersion: v1
kind
:
ConfigMap
metadata
:
name
:
mysql-cbio-db
namespace
:
cbio-on-demand
namespace
:
__NAMESPACE__
data
:
mysql.conf
:
"
#
Copyright
(c)
2014,
2016,
Oracle
and/or
its
affiliates.
All
rights
reserved.
\n
#
\n
#
This
program
is
free
software;
you
can
redistribute
it
and/or
...
...
yaml/configMap.yml
View file @
4af3be7b
...
...
@@ -2,7 +2,7 @@ apiVersion: v1
kind
:
ConfigMap
metadata
:
name
:
mysql-cbio-db
namespace
:
cbio-on-demand
namespace
:
__NAMESPACE__
data
:
mysql.conf
:
"
#
Copyright
(c)
2014,
2016,
Oracle
and/or
its
affiliates.
All
rights
reserved.
\n
#
\n
#
This
program
is
free
software;
you
can
redistribute
it
and/or
...
...
yaml/ingress-api.yml
View file @
4af3be7b
...
...
@@ -2,7 +2,7 @@ apiVersion: extensions/v1beta1
kind
:
Ingress
metadata
:
name
:
cbio
namespace
:
cbio-on-demand
namespace
:
__NAMESPACE__
spec
:
rules
:
-
http
:
...
...
yaml/ingress-proxy.yml
View file @
4af3be7b
...
...
@@ -2,7 +2,7 @@ apiVersion: extensions/v1beta1
kind
:
Ingress
metadata
:
name
:
cbio-proxy
namespace
:
cbio-on-demand
namespace
:
__NAMESPACE__
annotations
:
nginx.ingress.kubernetes.io/rewrite-target
:
/
spec
:
...
...
yaml/namespace.yml
View file @
4af3be7b
apiVersion
:
v1
kind
:
Namespace
metadata
:
name
:
cbio-on-demand
name
:
__NAMESPACE__
yaml/secret-db.yml
View file @
4af3be7b
...
...
@@ -2,7 +2,7 @@ apiVersion: v1
kind
:
Secret
metadata
:
name
:
mysql-env
namespace
:
cbio-on-demand
namespace
:
__NAMESPACE__
data
:
.env
:
TVlTUUxfUk9PVF9QQVNTV09SRD1QQHNzd29yZDEKTVlTUUxfVVNFUj1jYmlvCk1ZU1FMX1BBU1NXT1JEPVBAc3N3b3JkMQpNWVNRTF9EQVRBQkFTRT1jYmlvcG9ydGFsCgo=
type
:
Opaque
yaml/secret.yml
View file @
4af3be7b
...
...
@@ -2,7 +2,7 @@ apiVersion: v1
kind
:
Secret
metadata
:
name
:
mysql-env
namespace
:
cbio-on-demand
namespace
:
__NAMESPACE__
data
:
.env
:
TVlTUUxfUk9PVF9QQVNTV09SRD1QQHNzd29yZDEKTVlTUUxfVVNFUj1jYmlvCk1ZU1FMX1BBU1NXT1JEPVBAc3N3b3JkMQpNWVNRTF9EQVRBQkFTRT1jYmlvcG9ydGFsCgo=
type
:
Opaque
yaml/serviceAccount.yml
View file @
4af3be7b
...
...
@@ -2,4 +2,4 @@ apiVersion: v1
kind
:
ServiceAccount
metadata
:
name
:
cbio-api
namespace
:
cbio-on-demand
namespace
:
__NAMESPACE__
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