WSI is not being visualized
Background H&E WSI TIFFs are not visualized at all in xOpat, producing just empty views:
Minimal reproducible example using background WSI only.
defaults:
- default
- background: drive
- save: mlflow_standalone_run
title: FLASHxNanozoomer - Nanozoomer Report
background:
dir_name: /mnt/data/IIPImage/matejg/FLASHxNanozoomer/Nanozoomer/wsi_c
layer_name: Nanozoomer WSI
save:
metadata:
experiment_name: Testing
run_name: FLASHxNanozoomer - Nanozoomer Report
description: Comparison of two scanners using Mann-Whitney U-Test and Kolmogorov Smirnov test on predictions.`
Edited by Matej Gallo