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Major refactor for the reproducibility paper

Terézia Slaninákovárequested to merge
refactor into master

This is the main merge of refactor feature branch into master, where the code was completely redone as a part of working on the reproducibility paper of LMI. This refactor inroduces multiple changes to the structure and execution of the code. I focused mainly on:

  • the ease of running experiments through parametrization based on configs, thorough logging and saving of every result to a .csv file
  • the ease of development and debugging - better use of the logging module (multiple levels, etc.), more modular design, deletion of overly complex code, better documentation and comments
  • deletion of copy-paste segments of codes
  • TO BE DONE: Tests in the GitLab pipeline to ensure that the repo is in ready-to-be-used shape all the time

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