# this should normally be set to false. In some cases you could set this to true (e.g. for testing a feature of a newer release that is not related to the schema change in expected db version above):
db.suppress_schema_version_mismatch_errors=false
app.version=${timestamp}
db.version=${db.version}
# web page cosmetics
skin.title=EurOPDX cBioPortal
skin.email_contact=it at europdx eu
skin.authorization_message=Access to this portal is only available to authorized users of EurOPDX consortium.
skin.example_study_queries=tcga\ntcga -provisional\ntcga -moratorium\ntcga OR icgc\n-"cell line"\nprostate mskcc\nesophageal OR stomach\nserous\nbreast
skin.data_sets_header=The portal currently contains data from the following cancer genomics studies. The table below lists the number of available samples per data type and tumor.
skin.data_sets_footer=
#skin.examples_right_column_html=<ul><li><a href="case.do#/patient?studyId=ucec_tcga_pub&caseId=TCGA-BK-A0CC">Patient view of an endometrial cancer case</a></li></ul>
skin.right_nav.whats_new_blurb=<a class="twitter-timeline" href="https://twitter.com/europdx" data-tweet-limit="1"> Tweets by @EurOPDX </a>
# setting controlling the blurb
skin.blurb=<p>Welcome to the european instance of cBioPortal which provides <b>visualization</b>, <b>analysis</b> and <b>download</b> of large-scale cancer genomics datasets of EurOPDX consortium. This portal is run by <a href="https://www.cerit-sc.cz/about/news/cerit-sc-member-participates-in-eu-h2020-project-as-the-it-task-leader">Masaryk University</a> for <a href="https://cordis.europa.eu/project/rcn/212589_en.html">EDIReX: European Distributed Infrastructure for Research on patient-derived cancer Xenografts</a> project with kind support of cBioPortal developers from Weill Cornell Medicine (WCM, New York, NY, USA).</p><p>Please adhere to <u><a href="http://cancergenome.nih.gov/abouttcga/policies/publicationguidelines"> the TCGA publication guidelines</a></u> when using TCGA data in your publications.</p> <p><b>Please cite</b> <a href="http://www.ncbi.nlm.nih.gov/pubmed/23550210">Gao et al. <i>Sci. Signal.</i> 2013</a> & <a href="http://cancerdiscovery.aacrjournals.org/content/2/5/401.abstract">Cerami et al. <i>Cancer Discov.</i> 2012</a> when publishing results based on cBioPortal.</p>
skin.login.contact_html=If you think you have received this message in error, please contact us at <a style="color:#FF0000" href="mailto:europdx-cbioportal@googlegroups.com">europdx-cbioportal@googlegroups.com</a>
# setting controlling the saml registration
skin.login.saml.registration_html=Sign in
# settings controlling what to show in the right navigation bar
skin.right_nav.show_data_sets=true
skin.right_nav.show_examples=true
skin.right_nav.show_testimonials=false
# settings controlling what to show in the right navigation bar
skin.study_view.link_text=To build your own case set, try out our enhanced Study View.
# authentication
## is authorization enabled at all? (true, false)
authorization=false
## enable and set this property to specify a study group to be used to identify public studies for which no specific authorization entries are needed in the `authorities` table
# always_show_study_group=
## which method of authentication to use (false, googleplus, saml, openid, ad, ldap, noauthsessionservice)
authenticate=false
## Should the permissions for groups and users be filtered by this instance's app.name?
## (true means the system only handles "CBIOPORTAL:someGroupPermission" groups, false means "someGroupPermission" works)
filter_groups_by_appname=true
## settings to connect to googleplus auth infrastructure
googleplus.consumer.key=
googleplus.consumer.secret=
## SAML settings
saml.sp.metadata.entityid=
saml.idp.metadata.location=
saml.idp.metadata.entityid=
# saml keystore settings:
saml.keystore.location=
saml.keystore.password=
saml.keystore.private-key.key=
saml.keystore.private-key.password=
saml.keystore.default-key=
# How to send SAML request messages to the IDP.
# Set to "specificBinding" to configure specific binding:
saml.idp.comm.binding.settings=defaultBinding
# Configure the specific binding if above is specificBinding. Leave empty if defaultBinding.
# Link to My Cancer Genome. Please disable (set to false) when using cBioPortal with patient identifiable data due My Cancer Genome license restrictions.
